Juglans nigra microbiome 2017

Aaron Onufrak, Jennifer DeBruyn, William E. Klingeman, Denita Hadziabdic

University of Tennessee-Knoxville

Melissa Cregger, Dawn M. Klingeman

Oak Ridge National Laboratory

University of Tennessee-Knoxville

Geoff Williams, and Matt D. Ginzel

Purdue University

Link to Github project repository

How to cite:

Onufrak A, Williams G, Klingeman W, Cregger M, Klingeman M, Debruyn J, Ginzel, M, Hadziabdic D (2020) Regional differences in the structure of Juglans nigra phytobiome reflect geographical differences in Thousand Cankers Disease severity. Phytobiomes Journal. In Press.

Links to Rmarkdowns

• Soil bacterial microbiome data visualization and analysis (A. Onufrak)
• Soil fungal microbiome data visualization and analysis (A. Onufrak)
• Soil fungal guild analysis (A. Onufrak)
• Caulosphere bacterial microbiome data visualization and analysis (A. Onufrak)
• Caulosphere fungal microbiome data visualization and analysis (A. Onufrak)
• Caulosphere fungal guild analysis (A. Onufrak)
• Network analyis of fungal and bacterial microbiome (G. Williams)
• Data visualization of fungal networks (G. Williams)
• Tools for microbial network visualization (G. Williams)
• Rarefaction Curve Visualization (G. Williams)